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RNAi Experiment: Simmer:F29G9.3 Ace View of Simmer:F29G9.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F29G9.3 (aps-1)
Description of "F29G9.3"  The apt-2 gene encodes an adaptin: specifically, it encodes an ortholog of the sigma1 subunit of adaptor protein complex 1 (AP-1).
KOG Annotation  Clathrin adaptor complex, small subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:6020456..6021397)
Transcript overlap: 532 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 469
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F29G9.3" Links  Wormbase NCBI
Simmer:F29G9.3 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Larval  Lva
Lvl
Adult  Unc
Simmer:F29G9.3 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F29G9.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F29G9.3 Browse using GBrowse
Gene Graph