Link to T03D8.2Link to F31D4.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F31D4.1Link to F31D4.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:F31D4.1 Ace View of Simmer:F31D4.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F31D4.1
Description of "F31D4.1"  Associated GO Term : 3'-5' exoribonuclease activity
KOG Annotation  Exosomal 3'-5' exoribonuclease complex, subunit Rrp42
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:20838290..20839683)
Transcript overlap: 834 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 771
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F31D4.1" Links  Wormbase NCBI
Gene Inhibited  F31D4.2
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 58 nt Explain types of evidence for RNAi inhibition
External "F31D4.2" Links  Wormbase NCBI
Simmer:F31D4.1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Lva
Simmer:F31D4.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F31D4.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F31D4.2 Browse using GBrowse
Gene Graph
Gene Plot of F31D4.1 Browse using GBrowse
Gene Graph