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RNAi Experiment: Simmer:F43C1.3 Ace View of Simmer:F43C1.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F43C1.3
KOG Annotation  Predicted Zn-finger protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:4242940..4244133)
Transcript overlap: 435 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 414
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.559
Wormbase (BLAST) RNAi primary
External "F43C1.3" Links  Wormbase NCBI
Gene Inhibited  F43C1.6
Description of "F43C1.6"  Associated GO Term : RNA binding
KOG Annotation  Mitochondrial/chloroplast ribosomal L21 protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:4242940..4244133)
Transcript overlap: 389 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 326
Relative score: 0.787 (Best raw score= for Gene )
Specificity index: 0.441
Wormbase (BLAST) RNAi primary
External "F43C1.6" Links  Wormbase NCBI
Simmer:F43C1.3 Phenotypes Help with Phenotypes
Larval  Gro
Simmer:F43C1.3 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F43C1.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F43C1.6 Browse using GBrowse
Gene Graph
Gene Plot of F43C1.3 Browse using GBrowse
Gene Graph