Link to F46A9.5.1Link to F46A9.5.3Link to F46A9.5.2Link to F30A10.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F46A9.4geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:F46A9.5:Screen_B Ace View of Simmer:F46A9.5:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46A9.5 (skr-1)
Description of "F46A9.5"  The skr-1 gene encodes a homolog of Skp1 in S. cerevisiae that is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis.
KOG Annotation  SCF ubiquitin ligase, Skp1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9471321..9472339)
Transcript overlap: 576 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F46A9.5" Links  Wormbase NCBI
Simmer:F46A9.5:Screen_B Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:F46A9.5:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F46A9.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F46A9.5 Browse using GBrowse
Gene Graph