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RNAi Experiment: Simmer:F53A2.4 Ace View of Simmer:F53A2.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53A2.4 (nud-1)
Description of "F53A2.4"  nud-1 encodes the C. elegans ortholog of the Aspergillus nidulans nudC, which mediates nuclear migration along Aspergillus hyphae.
KOG Annotation  Nuclear distribution protein NUDC
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:13340746..13341901)
Transcript overlap: 812 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 770
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F53A2.4" Links  Wormbase NCBI
Simmer:F53A2.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Pvl
Rup
Unc
Phenotype  Unclassified Thin
Simmer:F53A2.4 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F53A2.4 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F53A2.4 Browse using GBrowse
Gene Graph