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RNAi Experiment: Simmer:F53G2.6 Ace View of Simmer:F53G2.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53G2.6 (tsr-1)
Description of "F53G2.6"  tsr-1 encodes a homolog of human transportin-SR, a nuclear transport receptor, and affects embryonic viability.
KOG Annotation  Nuclear transport regulator
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2467921..2469431)
Transcript overlap: 749 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 686
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F53G2.6" Links  Wormbase NCBI
Simmer:F53G2.6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Simmer:F53G2.6 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F53G2.6 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F53G2.6 Browse using GBrowse
Gene Graph