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RNAi Experiment: Simmer:F55A8.1 Ace View of Simmer:F55A8.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F55A8.1 (egl-18)
Description of "F55A8.1"  egl-18 encodes a member of the GATA-family of transcription factors that affects cell migration, cell fate specification; expressed in the head, in hypodermal seam cells, VC neurons, and vulval precursor cells.
KOG Annotation  GATA-4/5/6 transcription factors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:1913578..1914992)
Transcript overlap: 787 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 687
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F55A8.1" Links  Wormbase NCBI
Simmer:F55A8.1 Phenotypes Help with Phenotypes
Adult  Rup
Unc
Phenotype  Slu
Simmer:F55A8.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F55A8.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F55A8.1 Browse using GBrowse
Gene Graph