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RNAi Experiment: Simmer:F56D1.3 Ace View of Simmer:F56D1.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56D1.2
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (II:5474134..5475225)
Transcript overlap: 443 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 378
Specificity index: 0.5
External "F56D1.2" Links  Wormbase NCBI
Gene Inhibited  F56D1.3
Description of "F56D1.3"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
KOG Annotation  Mitochondrial/chloroplast ribosomal protein S16
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:5474134..5475225)
Transcript overlap: 450 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 379
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "F56D1.3" Links  Wormbase NCBI
Simmer:F56D1.3 Phenotypes Help with Phenotypes
Larval  Gro
Simmer:F56D1.3 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F56D1.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F56D1.2 Browse using GBrowse
Gene Graph
Gene Plot of F56D1.3 Browse using GBrowse
Gene Graph