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RNAi Experiment: Simmer:F56H1.4:Screen_A Ace View of Simmer:F56H1.4:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56H1.4 (rpt-5)
Description of "F56H1.4"  rpt-5 encodes a triple A ATPase subunit of the 26S proteasome's 19S regulatory particle (RP) base subcomplex; RPT-5 is required for embryonic, larval, and germline development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:5742390..5743588)
Transcript overlap: 1031 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 968
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F56H1.4" Links  Wormbase NCBI
Simmer:F56H1.4:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste brood size (6 out of 10)
Simmer:F56H1.4:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F56H1.4 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F56H1.4 Browse using GBrowse
Gene Graph