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RNAi Experiment: Simmer:K01G5.8a:Repeat_b Ace View of Simmer:K01G5.8a:Repeat_b
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K01G5.8
KOG Annotation  Conserved alpha-helical protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:10739705..10740697)
Transcript overlap: 416 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 300
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.736
Wormbase (BLAST) RNAi primary
External "K01G5.8" Links  Wormbase NCBI
Gene Inhibited  F16H11.2
Evidence for Inhibition 
Sliding Window Raw score: 96
Relative score: 0.36 (Best raw score= for Gene )
Specificity index: 0.264
External "F16H11.2" Links  Wormbase NCBI
Simmer:K01G5.8a:Repeat_b Phenotypes Help with Phenotypes
Phenotype  WT
Simmer:K01G5.8a:Repeat_b Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_K01G5.8a (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F16H11.2 Browse using GBrowse
Gene Graph
Gene Plot of K01G5.8 Browse using GBrowse
Gene Graph