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RNAi Experiment: Simmer:K07A12.3:Screen_B Ace View of Simmer:K07A12.3:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K07A12.3 (asg-1)
Description of "K07A12.3"  asg-1 encodes a homolog of the proton-translocating F0 ATP synthase complex subunit g; by homology, ASG-1 is predicted to function in ATP synthesis, although its precise role in ATP anabolism is not yet known; in C. elegans, asg-1 activity is required for transposon silencing in the germline, suggesting that healthy energy metabolism is necessary for this process; in addition, large-scale RNAi screens indicate that asg-1 activity is required for embryonic and germline development, normal post-embryonic growth rates, and normal body morphology.
KOG Annotation  Mitochondrial F1F0-ATP synthase, subunit g/ATP20
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8692669..8693549)
Transcript overlap: 477 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 435
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "K07A12.3" Links  Wormbase NCBI
Gene Inhibited  K07A12.5
Evidence for Inhibition 
ePCR Transcript overlap: 65 nt Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "K07A12.5" Links  Wormbase NCBI
Simmer:K07A12.3:Screen_B Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Stp
Simmer:K07A12.3:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_K07A12.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of K07A12.3 Browse using GBrowse
Gene Graph
Gene Plot of K07A12.5 Browse using GBrowse
Gene Graph