Link to R07E5.3Link to R07E5.14.2Link to R07E5.14.1Link to R07E5.2.1Link to R07E5.2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to R07E5.3Link to R07E5.14.2Link to R07E5.14.1geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:R07E5.3 Ace View of Simmer:R07E5.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R07E5.3
Description of "R07E5.3"  The R07E5.3 gene encodes a homolog of SNF5/Ini1, a component of the SWI/SNF complex that is conserved from yeast to mammals and that is involved in chromatin remodeling; R07E5.3 may be involved in asymmetric cell division of the T cells.
KOG Annotation  SWI-SNF chromatin remodeling complex, Snf5 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:4405016..4405938)
Transcript overlap: 800 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 737
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "R07E5.3" Links  Wormbase NCBI
Simmer:R07E5.3 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:R07E5.3 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_R07E5.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of R07E5.3 Browse using GBrowse
Gene Graph