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RNAi Experiment: Simmer:R11D1.8:Repeat_a Ace View of Simmer:R11D1.8:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R11D1.8 (rpl-28)
Description of "R11D1.8"  rpl-28 encodes a large ribosomal subunit L28 protein.
KOG Annotation  60S ribosomal protein L28
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:12729710..12730886)
Transcript overlap: 445 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 413
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "R11D1.8" Links  Wormbase NCBI
Gene Inhibited  R11D1.9
Description of "R11D1.9"  Associated GO Term : structural constituent of ribosome
KOG Annotation  Uncharacterized conserved protein NOF (Neighbor of FAU)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:12729710..12730886)
Transcript overlap: 108 nt		 Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "R11D1.9" Links  Wormbase NCBI
Simmer:R11D1.8:Repeat_a Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Lva
Simmer:R11D1.8:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_R11D1.8 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of R11D1.9 Browse using GBrowse
Gene Graph
Gene Plot of R11D1.8 Browse using GBrowse
Gene Graph