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RNAi Experiment: Simmer:R12C12.8:Repeat_a Ace View of Simmer:R12C12.8:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R12C12.8
Description of "R12C12.8"  Associated GO Term : protein localization
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:6058559..6060521)
Transcript overlap: 836 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 689
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.617
Wormbase (BLAST) RNAi primary
External "R12C12.8" Links  Wormbase NCBI
Gene Inhibited  C25H3.8
Description of "C25H3.8"  Associated GO Term : hydroxymethylglutaryl-CoA reductase (NADPH) activity
KOG Annotation  Vacuolar protein sorting-associated protein
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 428
Relative score: 0.621 (Best raw score= for Gene )
Specificity index: 0.383
Wormbase (BLAST) RNAi primary
External "C25H3.8" Links  Wormbase NCBI
Simmer:R12C12.8:Repeat_a Phenotypes Help with Phenotypes
Larval  Gro
Lvl
Adult  Unc
Simmer:R12C12.8:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_R12C12.8 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C25H3.8 Browse using GBrowse
Gene Graph
Gene Plot of R12C12.8 Browse using GBrowse
Gene Graph