Link to T01C3.11Link to T01C3.6.2Link to T01C3.6.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T01C3.11RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Simmer:T01C3.6 Ace View of Simmer:T01C3.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T01C3.6 (rps-16)
Description of "T01C3.6"  rps-16 encodes a small ribosomal subunit S16 protein.
KOG Annotation  40S ribosomal protein S16
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:15002268..15003205)
Transcript overlap: 532 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 511
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.706
Wormbase (BLAST) RNAi primary
External "T01C3.6" Links  Wormbase NCBI
Gene Inhibited  T01C3.11
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:15002268..15003205)
Transcript overlap: 255 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 213
Relative score: 0.417 (Best raw score= for Gene )
Specificity index: 0.294
Wormbase (BLAST) RNAi primary
External "T01C3.11" Links  Wormbase NCBI
Simmer:T01C3.6 Phenotypes Help with Phenotypes
Larval  Lva
Adult  Ste brood size (6 out of 10)
Simmer:T01C3.6 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T01C3.6 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T01C3.6 Browse using GBrowse
Gene Graph
Gene Plot of T01C3.11 Browse using GBrowse
Gene Graph