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RNAi Experiment: Simmer:T03E6.7 Ace View of Simmer:T03E6.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T03E6.7 (cpl-1)
Description of "T03E6.7"  cpl-1 encodes a member of the cathepsin L-like cysteine protease family required for embryonic viability and normal growth; expressed in eggshells and throughout early embryos, accumulates in intestinal cells during late embryogenesis, and expressed in the cuticle, gonad, and pharynx later in development.
KOG Annotation  Cysteine proteinase Cathepsin L
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:16595987..16598115)
Transcript overlap: 808 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 766
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T03E6.7" Links  Wormbase NCBI
Simmer:T03E6.7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Unc
Simmer:T03E6.7 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T03E6.7 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T03E6.7 Browse using GBrowse
Gene Graph