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RNAi Experiment: Simmer:T06D8.8 Ace View of Simmer:T06D8.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06D8.8 (rpn-9)
Description of "T06D8.8"  rpn-9 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that that affects body morphology, embryonic viability, locomotion, larval viability, fertility, and growth; interacts with RPN-11 in yeast two-hybrid assays.
KOG Annotation  26S proteasome regulatory complex, subunit RPN9/PSMD13
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:11238017..11239059)
Transcript overlap: 886 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 828
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T06D8.8" Links  Wormbase NCBI
Simmer:T06D8.8 Phenotypes Help with Phenotypes
Larval  Gro
Adult  Bmd
Simmer:T06D8.8 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T06D8.8 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T06D8.8 Browse using GBrowse
Gene Graph