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RNAi Experiment: Simmer:T06G6.11:Screen_B Ace View of Simmer:T06G6.11:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06G6.11
Description of "T06G6.11"  Associated GO Term : electron transporter activity
KOG Annotation  Thiol-disulfide isomerase and thioredoxin
Uncharacterized conserved protein, contains WD40 repeats and FYVE domains
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12707406..12708434)
Transcript overlap: 740 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 656
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.799
Wormbase (BLAST) RNAi primary
External "T06G6.11" Links  Wormbase NCBI
Gene Inhibited  D2013.2
Description of "D2013.2"  Associated GO Term : zinc ion binding
KOG Annotation  Uncharacterized conserved protein, contains WD40 repeats and FYVE domains
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 165
Relative score: 0.252 (Best raw score= for Gene )
Specificity index: 0.201
Wormbase (BLAST) RNAi secondary
External "D2013.2" Links  Wormbase NCBI
Simmer:T06G6.11:Screen_B Phenotypes Help with Phenotypes
Adult  Dpy could not be confirmed by re-testing
Simmer:T06G6.11:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T06G6.11 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T06G6.11 Browse using GBrowse
Gene Graph
Gene Plot of D2013.2 Browse using GBrowse
Gene Graph