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RNAi Experiment: Simmer:T21E3.1:Screen_A Ace View of Simmer:T21E3.1:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T21E3.1
Description of "T21E3.1"  Associated GO Term : protein phosphatase activity
KOG Annotation  Protein tyrosine phosphatase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3932199..3933313)
Transcript overlap: 1054 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 991
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.551
Wormbase (BLAST) RNAi primary
External "T21E3.1" Links  Wormbase NCBI
Gene Inhibited  R12E2.10
Description of "R12E2.10"  Associated GO Term : protein phosphatase activity
KOG Annotation  Protein tyrosine phosphatase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 806
Relative score: 0.813 (Best raw score= for Gene )
Specificity index: 0.449
Wormbase (BLAST) RNAi primary
External "R12E2.10" Links  Wormbase NCBI
Simmer:T21E3.1:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste
Simmer:T21E3.1:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T21E3.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of R12E2.10 Browse using GBrowse
Gene Graph
Gene Plot of T21E3.1 Browse using GBrowse
Gene Graph