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RNAi Experiment: Simmer:T22E5.5:Repeat_a Ace View of Simmer:T22E5.5:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T22E5.5 (mup-2)
Description of "T22E5.5"  mup-2 encodes the muscle contractile protein troponin T ( TnT ) homologous to vertebrate and invertebrate TnT and contains an invertebrate- specific COOH -terminal tail; mup-2 affects embryonic body wall muscle cell contraction, sarcomere organization, cell positioning, regulated muscle contraction in larval and adult body wall muscle, epidermal morphogenesis, and is required for proper function of the hermaphrodite nonstriated oviduct myoepithelial sheath, proper growth, and fertility.
KOG Annotation  Troponin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:6408575..6409732)
Transcript overlap: 1035 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 846
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T22E5.5" Links  Wormbase NCBI
Simmer:T22E5.5:Repeat_a Phenotypes Help with Phenotypes
Larval  Gro
Adult  Unc
Simmer:T22E5.5:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T22E5.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T22E5.5 Browse using GBrowse
Gene Graph