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RNAi Experiment: Simmer:T23D8.5:Screen_A Ace View of Simmer:T23D8.5:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T23D8.5 (his-67)
Description of "T23D8.5"  his-67 encodes an H4 histone required for embryonic viability and growth.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9987606..9988805)
Transcript overlap: 312 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 270
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.816
Wormbase (BLAST) RNAi primary
External "T23D8.5" Links  Wormbase NCBI
Gene Inhibited  T10C6.14 (his-1)
Description of "T10C6.14"  his-1 encodes an H4 histone; his-1 is contained within the histone gene cluster HIS1; transcript analysis suggests that it encodes the major class of H4 transcripts.
Evidence for Inhibition 
Sliding Window Raw score: 61
Relative score: 0.226 (Best raw score= for Gene )
Specificity index: 0.184
Wormbase (BLAST) RNAi secondary
External "T10C6.14" Links  Wormbase NCBI
Simmer:T23D8.5:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Lva
Simmer:T23D8.5:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_T23D8.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of T23D8.5 Browse using GBrowse
Gene Graph
Gene Plot of T10C6.14 Browse using GBrowse
Gene Graph