Link to Y17G9B.3RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H02I12.8Link to Y62E10A.15geneMap Link to H02I12.8RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y17G9B.3Link to Y62E10A.15geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H02I12.8Link to Y17G9B.3Link to C01F6.3geneMap Link to C01F6.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H02I12.8Link to Y17G9B.3geneMap
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RNAi Experiment: Simmer:Y17G9B.h Ace View of Simmer:Y17G9B.h
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y17G9B.3 (cyp-31A3)
Description of "Y17G9B.3"  The Y17G9B.3 gene encodes a homolog of the human gene CYP7B1, which when mutated leads to pseudovitamin D deficiency rickets (OMIM:264700).
KOG Annotation  Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:4760978..4763162)
Transcript overlap: 1536 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1410
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.768
Wormbase (BLAST) RNAi primary
External "Y17G9B.3" Links  Wormbase NCBI
Gene Inhibited  H02I12.8 (cyp-31A2)
Description of "H02I12.8"  Associated GO Term : monooxygenase activity
KOG Annotation  Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 226
Relative score: 0.16 (Best raw score= for Gene )
Specificity index: 0.123
Wormbase (BLAST) RNAi secondary
External "H02I12.8" Links  Wormbase NCBI
Gene Inhibited  Y62E10A.15 (cyp-31A5)
Evidence for Inhibition 
Sliding Window Raw score: 78
Relative score: 0.055 (Best raw score= for Gene )
Specificity index: 0.042
Wormbase (BLAST) RNAi secondary
External "Y62E10A.15" Links  Wormbase NCBI
Gene Inhibited  C01F6.3 (cyp-31A1)
Evidence for Inhibition 
Sliding Window Raw score: 122
Relative score: 0.087 (Best raw score= for Gene )
Specificity index: 0.066
Wormbase (BLAST) RNAi secondary
External "C01F6.3" Links  Wormbase NCBI
Simmer:Y17G9B.h Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Simmer:Y17G9B.h Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y17G9B.h (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of H02I12.8 Browse using GBrowse
Gene Graph
Gene Plot of Y17G9B.3 Browse using GBrowse
Gene Graph
Gene Plot of Y62E10A.15 Browse using GBrowse
Gene Graph
Gene Plot of C01F6.3 Browse using GBrowse
Gene Graph