Link to Y24D9A.8a.1Link to Y24D9A.8b.1Link to Y24D9A.8a.2Link to Y24D9A.8b.2Link to Y24D9A.8a.3Link to Y24D9A.4a.1Link to Y24D9A.4a.2Link to Y24D9A.4cLink to Y24D9A.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y73B3A.18aLink to Y73B3A.18bLink to Y108F1.3geneMap Link to F55F10.1Link to Y24D9A.8a.1Link to Y24D9A.8a.2Link to Y24D9A.8b.1Link to Y24D9A.8b.2Link to Y24D9A.8a.3Link to Y24D9A.4cRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y73B3A.2Link to Y73B3A.18aLink to Y73B3A.18bgeneMap Link to Y73B3A.18bLink to Y73B3A.18aRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y24D9A.4a.1Link to Y24D9A.4cLink to Y24D9A.4a.2geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:Y24D9A.d Ace View of Simmer:Y24D9A.d
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y24D9A.4 (rpl-7A)
Description of "Y24D9A.4"  rpl-8 encodes a large ribosomal subunit L7a protein required in mass RNAi assays for fertility, vulval development, and general health; the rpl-8 transcription unit has one nonsense transcript that is up-regulated in vivo by smg[-] mutations, indicating that rpl-8 is a natural substrate for SMG-mediated nonsense suppresssion; several other natural mRNA substrates of SMG suppression (e.g., rpl-3, rpl-10, rpl-12) have protein products that are involved in translation.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:4389085..4390735)
Transcript overlap: 877 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 772
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.658
Wormbase (BLAST) RNAi primary
External "Y24D9A.4" Links  Wormbase NCBI
Gene Inhibited  Y24D9A.8
Description of "Y24D9A.8"  Y24D9A.8 is orthologous to the human gene TRANSALDOLASE 1 (TALDO1; OMIM:602063), which when mutated leads to disease.
Evidence for Inhibition 
ePCR Transcript overlap: 6 nt Explain types of evidence for RNAi inhibition
External "Y24D9A.8" Links  Wormbase NCBI
Gene Inhibited  Y73B3A.18
Description of "Y73B3A.18"  Associated GO Term : structural constituent of ribosome
Evidence for Inhibition 
Sliding Window Raw score: 527
Relative score: 0.519 (Best raw score= for Gene )
Specificity index: 0.342
Wormbase (BLAST) RNAi primary
External "Y73B3A.18" Links  Wormbase NCBI
Simmer:Y24D9A.d Phenotypes Help with Phenotypes
Adult  Ste
Simmer:Y24D9A.d Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y24D9A.d (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y24D9A.4 Browse using GBrowse
Gene Graph
Gene Plot of Y73B3A.18 Browse using GBrowse
Gene Graph
Gene Plot of Y24D9A.8 Browse using GBrowse
Gene Graph