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RNAi Experiment: Simmer:Y39G10A_246.h:Screen_A Ace View of Simmer:Y39G10A_246.h:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39G10AR.8
Description of "Y39G10AR.8"  Associated GO Term : GTP binding
KOG Annotation  Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:2315085..2316597)
Transcript overlap: 850 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 787
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.794
Wormbase (BLAST) RNAi primary
External "Y39G10AR.8" Links  Wormbase NCBI
Gene Inhibited  Y39G10AR.7
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:2315085..2316597)
Transcript overlap: 225 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 204
Relative score: 0.259 (Best raw score= for Gene )
Specificity index: 0.206
Wormbase (BLAST) RNAi primary
External "Y39G10AR.7" Links  Wormbase NCBI
Simmer:Y39G10A_246.h:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Dpy
Ste brood size (6 out of 10)
Simmer:Y39G10A_246.h:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y39G10A_246.h (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y39G10AR.8 Browse using GBrowse
Gene Graph
Gene Plot of Y39G10AR.7 Browse using GBrowse
Gene Graph