Link to Y39G10AR.13.1Link to Y39G10AR.13.2Link to Y39G10AR.9RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y39G10AR.9Link to Y39G10AR.21.1Link to Y39G10AR.21.2RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Simmer:Y39G10A_246.i:Screen_A Ace View of Simmer:Y39G10A_246.i:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39G10AR.13 (icp-1)
Description of "Y39G10AR.13"  The icp-1 gene encodes a 'chromosomal passenger protein'; inactivation of icp-1 by RNAi leads to a complete failure of chromosome segregation during the first mitotic division of embryonic development.
KOG Annotation  Inner centromere protein (INCENP), C-terminal domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:2304764..2307100)
Transcript overlap: 1828 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1723
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y39G10AR.13" Links  Wormbase NCBI
Gene Inhibited  Y39G10AR.9
KOG Annotation  WD40 repeat-containing protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 48 nt Explain types of evidence for RNAi inhibition
External "Y39G10AR.9" Links  Wormbase NCBI
Simmer:Y39G10A_246.i:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:Y39G10A_246.i:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y39G10A_246.i (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y39G10AR.13 Browse using GBrowse
Gene Graph
Gene Plot of Y39G10AR.9 Browse using GBrowse
Gene Graph