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RNAi Experiment: Simmer:Y39G10A_246.j:Screen_A Ace View of Simmer:Y39G10A_246.j:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39G10AR.12 (tpxl-1)
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:2301762..2304217)
Transcript overlap: 1354 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1291
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.568
Wormbase (BLAST) RNAi primary
External "Y39G10AR.12" Links  Wormbase NCBI
Gene Inhibited  Y39G10AR.10
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (I:2301762..2304217)
Transcript overlap: 1063 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1021
Relative score: 0.761 (Best raw score= for Gene )
Specificity index: 0.432
Wormbase (BLAST) RNAi primary
External "Y39G10AR.10" Links  Wormbase NCBI
Simmer:Y39G10A_246.j:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:Y39G10A_246.j:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y39G10A_246.j (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y39G10AR.10 Browse using GBrowse
Gene Graph
Gene Plot of Y39G10AR.12 Browse using GBrowse
Gene Graph