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RNAi Experiment: Simmer:Y43E12A.1:Screen Ace View of Simmer:Y43E12A.1:Screen
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  H31G24.4 (cyb-2.2)
Description of "H31G24.4"  Associated GO Term : regulation of cell cycle
KOG Annotation  Cyclin B and related kinase-activating proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:4115189..4116132)
Transcript overlap: 768 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 459
Relative score: 0.671 (Best raw score= for Gene )
Specificity index: 0.402
Wormbase (BLAST) RNAi primary
External "H31G24.4" Links  Wormbase NCBI
Gene Inhibited  Y43E12A.1 (cyb-2.1)
Description of "Y43E12A.1"  Associated GO Term : regulation of cell cycle
KOG Annotation  Cyclin B and related kinase-activating proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:10986216..10987157)
Transcript overlap: 768 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 684
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.598
Wormbase (BLAST) RNAi primary
External "Y43E12A.1" Links  Wormbase NCBI
Simmer:Y43E12A.1:Screen Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Simmer:Y43E12A.1:Screen Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y43E12A.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of H31G24.4 Browse using GBrowse
Gene Graph
Gene Plot of Y43E12A.1 Browse using GBrowse
Gene Graph