Link to Y46G5A.4RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y46G5A.6RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y57A10A.19geneMap
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RNAi Experiment: Simmer:Y46G5.d Ace View of Simmer:Y46G5.d
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y46G5A.4
Description of "Y46G5A.4"  Associated GO Term : nucleotide binding
KOG Annotation  RNA helicase BRR2, DEAD-box superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:12734485..12736787)
Transcript overlap: 2122 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 2038
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.882
Wormbase (BLAST) RNAi primary
External "Y46G5A.4" Links  Wormbase NCBI
Gene Inhibited  Y46G5A.6
Description of "Y46G5A.6"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
KOG Annotation  RNA helicase BRR2, DEAD-box superfamily
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 272
Relative score: 0.133 (Best raw score= for Gene )
Specificity index: 0.118
Wormbase (BLAST) RNAi secondary
External "Y46G5A.6" Links  Wormbase NCBI
Simmer:Y46G5.d Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:Y46G5.d Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y46G5.d (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y46G5A.4 Browse using GBrowse
Gene Graph
Gene Plot of Y46G5A.6 Browse using GBrowse
Gene Graph