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RNAi Experiment: Simmer:Y47D3A.l Ace View of Simmer:Y47D3A.l
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y47D3A.6 (tra-1)
Description of "Y47D3A.6"  The tra-1 gene encodes a homolog of human GLI3, which when mutated leads to either Greig cephalopolysyndactyly syndrome or Pallister-Hall syndrome (OMIM:165240).
KOG Annotation  Zn-finger
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:11194493..11195641)
Transcript overlap: 254 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 212
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y47D3A.6" Links  Wormbase NCBI
Simmer:Y47D3A.l Phenotypes Help with Phenotypes
Adult  Pvl
Stp
Simmer:Y47D3A.l Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y47D3A.l (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y47D3A.6 Browse using GBrowse
Gene Graph