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RNAi Experiment: Simmer:Y47G6A_245.f:Screen_B Ace View of Simmer:Y47G6A_245.f:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y47G6A.20 (rnp-6)
Description of "Y47G6A.20"  rnp-6 encodes an ortholog of HALF-PINT in D. melanogaster and FBP Interacting Repressor (FIR)/PUF60 in mammals, predicted to be involved in mRNA splicing regulation, mRNA localization, or transcriptional regulation via TFIIH.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3544361..3546663)
Transcript overlap: 661 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 598
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y47G6A.20" Links  Wormbase NCBI
Simmer:Y47G6A_245.f:Screen_B Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Larval  Gro
Simmer:Y47G6A_245.f:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y47G6A_245.f (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y47G6A.20 Browse using GBrowse
Gene Graph