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RNAi Experiment: Simmer:Y47G6A_246.b:Screen_A Ace View of Simmer:Y47G6A_246.b:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y47G6A.12 (sep-1)
Description of "Y47G6A.12"  The sep-1 gene encodes a homolog of separase, a protease that splits segregating chromosomes at their centromeres during anaphase by proteolyzing the Scc1 subunit of cohesin.
KOG Annotation  Regulator of spindle pole body duplication
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3433957..3436255)
Transcript overlap: 1693 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1559
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y47G6A.12" Links  Wormbase NCBI
Simmer:Y47G6A_246.b:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Pvl
Stp
Simmer:Y47G6A_246.b:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y47G6A_246.b (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y47G6A.12 Browse using GBrowse
Gene Graph