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RNAi Experiment: Simmer:Y49A3A.2 Ace View of Simmer:Y49A3A.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49A3A.2 (vha-13)
Description of "Y49A3A.2"  Associated GO Term : nucleotide binding
KOG Annotation  Vacuolar H+-ATPase V1 sector, subunit A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:14355518..14356605)
Transcript overlap: 988 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 946
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49A3A.2" Links  Wormbase NCBI
Simmer:Y49A3A.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste brood size (6 out of 10)
Simmer:Y49A3A.2 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y49A3A.2 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y49A3A.2 Browse using GBrowse
Gene Graph