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RNAi Experiment: Simmer:Y49E10.14 Ace View of Simmer:Y49E10.14
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.14 (pie-1)
Description of "Y49E10.14"  pie-1 encodes a C-x8-C-x5-C-x3-H-type zinc-finger protein; maternally provided PIE-1 is essential for germline cell fate determination, as it functions as a repressor of RNA polymerase II-dependent gene expression in the developing germ line; PIE-1 localization, initially uniform and then concentrated in the posterior germ cell lineages, is regulated by other maternally supplied gene products including PAR-1, MEX-5, and MEX-6.
KOG Annotation  CCCH-type Zn-finger protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12426802..12429039)
Transcript overlap: 1051 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 946
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49E10.14" Links  Wormbase NCBI
Simmer:Y49E10.14 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:Y49E10.14 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y49E10.14 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y49E10.14 Browse using GBrowse
Gene Graph