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RNAi Experiment: Simmer:Y53F4B.i:Repeat_a Ace View of Simmer:Y53F4B.i:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y53F4B.6
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:14985305..14987289)
Transcript overlap: 327 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 264
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.633
Wormbase (BLAST) RNAi primary
External "Y53F4B.6" Links  Wormbase NCBI
Gene Inhibited  Y48B6A.3
Description of "Y48B6A.3"  Associated GO Term : exonuclease activity
KOG Annotation  5'-3' exonuclease HKE1/RAT1
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 153
Relative score: 0.58 (Best raw score= for Gene )
Specificity index: 0.367
Wormbase (BLAST) RNAi secondary
External "Y48B6A.3" Links  Wormbase NCBI
Simmer:Y53F4B.i:Repeat_a Phenotypes Help with Phenotypes
Larval  Gro
Adult  Lon
Unc
Simmer:Y53F4B.i:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y53F4B.i (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y53F4B.6 Browse using GBrowse
Gene Graph
Gene Plot of Y48B6A.3 Browse using GBrowse
Gene Graph