Link to H06I04.4a.2Link to H06I04.4a.1Link to H06I04.4b.1Link to H06I04.4a.3Link to H06I04.4b.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K08C9.7Link to F34H10.1Link to Y105E8B.10geneMap Link to K08C9.7RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H06I04.4b.1Link to H06I04.4b.2Link to H06I04.4a.3Link to H06I04.4a.2Link to H06I04.4a.1geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:Y53G8B_1025.b Ace View of Simmer:Y53G8B_1025.b
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  H06I04.4 (ubl-1)
Description of "H06I04.4"  ubl-1 encodes a protein similar to Drosophila ubiquitin/ ribosomal protein S27a that affects body length, fertility, and larval viability.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:3067013..3069240)
Transcript overlap: 570 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 507
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.851
Wormbase (BLAST) RNAi primary
External "H06I04.4" Links  Wormbase NCBI
Gene Inhibited  K08C9.7
KOG Annotation  Ubiquitin/40S ribosomal protein S27a fusion
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 89
Relative score: 0.176 (Best raw score= for Gene )
Specificity index: 0.149
External "K08C9.7" Links  Wormbase NCBI
Simmer:Y53G8B_1025.b Phenotypes Help with Phenotypes
Larval  Lva
Simmer:Y53G8B_1025.b Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y53G8B_1025.b (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of H06I04.4 Browse using GBrowse
Gene Graph
Gene Plot of K08C9.7 Browse using GBrowse
Gene Graph