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RNAi Experiment: Simmer:Y63D3A.7:Screen_A Ace View of Simmer:Y63D3A.7:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y63D3A.7
KOG Annotation  NADH:ubiquinone oxidoreductase NDUFA2/B8 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:14113126..14114110)
Transcript overlap: 441 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 357
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y63D3A.7" Links  Wormbase NCBI
Gene Inhibited  Y63D3A.6 (dnj-29)
Description of "Y63D3A.6"  This gene encodes a protein containing a DnaJ ('J') domain.
KOG Annotation  Molecular chaperone (DnaJ superfamily)
Molecular chaperone SEC63, endoplasmic reticulum translocon component
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 38 nt Explain types of evidence for RNAi inhibition
External "Y63D3A.6" Links  Wormbase NCBI
Simmer:Y63D3A.7:Screen_A Phenotypes Help with Phenotypes
Larval  Lva
Simmer:Y63D3A.7:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y63D3A.7 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y63D3A.6 Browse using GBrowse
Gene Graph
Gene Plot of Y63D3A.7 Browse using GBrowse
Gene Graph