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RNAi Experiment: Simmer:Y87G2A.l:Screen_B Ace View of Simmer:Y87G2A.l:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y87G2A.5 (vrs-2)
Description of "Y87G2A.5"  vrs-2 encodes a predicted cytoplasmic valyl-tRNA synthetase (ValRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of valine to its cognate tRNA and is thus required for protein biosynthesis; in C. elegans, VRS-2 activity is required for embryonic and germline development.
KOG Annotation  Valyl-tRNA synthetase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:13553988..13554336)
Transcript overlap: 349 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 328
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y87G2A.5" Links  Wormbase NCBI
Simmer:Y87G2A.l:Screen_B Phenotypes Help with Phenotypes
Larval  Gro
Adult  Sma
Simmer:Y87G2A.l:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_Y87G2A.l (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of Y87G2A.5 Browse using GBrowse
Gene Graph