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RNAi Experiment: Simmer:ZK1098.7 Ace View of Simmer:ZK1098.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK1098.7
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:9522860..9523864)
Transcript overlap: 457 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 380
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.697
Wormbase (BLAST) RNAi primary
External "ZK1098.7" Links  Wormbase NCBI
Gene Inhibited  ZK1098.1
Description of "ZK1098.1"  ZK1098.1 encodes a protein, with multiple WW/rsp5/WWP domains and FF domains, required for embryonic viability and for normally high rates of postembryonic growth.
KOG Annotation  Spliceosomal protein FBP11/Splicing factor PRP40
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:9522860..9523864)
Transcript overlap: 228 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 165
Relative score: 0.435 (Best raw score= for Gene )
Specificity index: 0.303
Wormbase (BLAST) RNAi primary
External "ZK1098.1" Links  Wormbase NCBI
Simmer:ZK1098.7 Phenotypes Help with Phenotypes
Larval  Gro
Simmer:ZK1098.7 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_ZK1098.7 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of ZK1098.7 Browse using GBrowse
Gene Graph
Gene Plot of ZK1098.1 Browse using GBrowse
Gene Graph