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RNAi Experiment: Simmer:ZK287.5 Ace View of Simmer:ZK287.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK287.5 (rbx-1)
Description of "ZK287.5"  The rbx-1 gene encodes an ortholog of the mammalian RING box protein RBX1 (or ROC1), which interacts with several cullins and is a subunit of both the von Hippel-Lindau (VHL) tumor suppressor complex and of the SCF ubiquitin-ligase (E3) complex.
KOG Annotation  SCF ubiquitin ligase, Rbx1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:9692132..9693169)
Transcript overlap: 635 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 572
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "ZK287.5" Links  Wormbase NCBI
Simmer:ZK287.5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Larval  Lva
Simmer:ZK287.5 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_ZK287.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of ZK287.5 Browse using GBrowse
Gene Graph