Link to ZK328.5bLink to ZK328.5aRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:ZK328.5 Ace View of Simmer:ZK328.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK328.5 (npp-10)
Description of "ZK328.5"  npp-10 is orthologous to the human gene NUCLEOPORIN, 98-KD (NUP98; OMIM:601021), which can promote leukemias (myelodysplastic syndromes, AML, or CML) when chromosomally rearranged.
KOG Annotation  Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:6013941..6015086)
Transcript overlap: 1099 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1057
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "ZK328.5" Links  Wormbase NCBI
Simmer:ZK328.5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:ZK328.5 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_ZK328.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of ZK328.5 Browse using GBrowse
Gene Graph