| RNAi Experiment: TH:195-b1 |
Ace View of TH:195-b1
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| Genes Inhibited |
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| Gene Inhibited |
F11G11.10 (col-17) |
| Description of "F11G11.10" |
col-17 encodes a collagen which is expressed in all developmental stages except eggs, like col-15, col-16, and col-20; collagen genes with this expression pattern may be used for synthesis of cuticles after the L1 stage (e.g., the L4 cuticle). |
| KOG Annotation |
Collagens (type IV and type XIII), and related proteins
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| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (II:4867250..4867394)
Transcript overlap: 145 nt |
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| Sliding Window |
Raw score: 74
Relative score: 0.597 (Best raw score= for Gene )
Specificity index: 0.374 |
| Wormbase (BLAST) |
RNAi primary |
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| External "F11G11.10" Links |
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| Gene Inhibited |
F11G11.12 (col-73) |
| Description of "F11G11.12" |
Associated GO Term : structural constituent of cuticle |
| KOG Annotation |
Collagens (type IV and type XIII), and related proteins
|
|
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (II:4872796..4872940)
Transcript overlap: 145 nt |
|
| Sliding Window |
Raw score: 124
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.626 |
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| External "F11G11.12" Links |
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| TH:195-b1 Phenotypes |
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| TH:195-b1 Experiment Details |
Ace View |
| RNAi Reagent & Type |
TH:195-b1 (PCR_reagent) |
| Gene Plot of F11G11.12 |
Browse using GBrowse
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| Gene Plot of F11G11.10 |
Browse using GBrowse
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