| RNAi Experiment: TH:248-e6 |
Ace View of TH:248-e6
|
| Genes Inhibited |
 |
| Gene Inhibited |
F54E12.1 (his-55) |
| Description of "F54E12.1" |
his-55 encodes an H3 histone; by homology, HIS-55 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-55 is a replication-dependent histone locus that resides in a histone gene-rich region on chromosome IV. |
| Evidence for Inhibition |
| ePCR |
Status: Unique_ePCR (IV:11337739..11338054)
Transcript overlap: 231 nt |
|
| Sliding Window |
Raw score: 189
Relative score: 0.661 (Best raw score= for Gene )
Specificity index: 0.238 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F54E12.1" Links |
  |
| Gene Inhibited |
F22B3.2 (his-63) |
| Description of "F22B3.2" |
his-63 encodes an H3 histone; by homology, HIS-63 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-63 is a replication-dependent histone locus. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 182
Relative score: 0.636 (Best raw score= for Gene )
Specificity index: 0.229 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F22B3.2" Links |
|
| Gene Inhibited |
B0035.10 (his-45) |
| Description of "B0035.10" |
his-45 encodes an H3 histone. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 286
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.36 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "B0035.10" Links |
|
| Gene Inhibited |
W09H1.2 (his-73) |
| Description of "W09H1.2" |
his-73 encodes an H3 histone; by homology, HIS-73 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-73 is a replication-dependent histone locus. |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 138
Relative score: 0.483 (Best raw score= for Gene )
Specificity index: 0.174 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "W09H1.2" Links |
|
| TH:248-e6 Phenotypes |
|
|
| TH:248-e6 Experiment Details |
Ace View |
| RNAi Reagent & Type |
TH:248-e6 (PCR_reagent) |
| Gene Plot of F22B3.2 |
Browse using GBrowse
|
 |
| Gene Plot of F54E12.1 |
Browse using GBrowse
|
 |
| Gene Plot of B0035.10 |
Browse using GBrowse
|
 |
| Gene Plot of W09H1.2 |
Browse using GBrowse
|
 |
![Adult](JavaScript:void
window.open("/cgi-bin/rnaidb/popUpImage.cgi?imgName=N2wormfinal.png",
"RNAiDB Help","toolbar=no, location=no, directories=no,
status=no, menubar=no, scrollbars=yes, resizable=no,
copyhistory=no, width=1000, height=550"))
