Link to C38D4.1aLink to C38D4.1bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37D8A.12a.1Link to W03G9.3Link to K01G5.3Link to Y37D8A.12a.2Link to W05F2.2Link to Y37D8A.12bLink to H04D03.1geneMap Link to W03G9.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to Y37D8A.12a.1Link to K01G5.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to Y37D8A.12a.2Link to Y37D8A.12bgeneMap Link to H04D03.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37D8A.12a.1Link to W03G9.3Link to K01G5.3Link to C38D4.1aLink to Y37D8A.12bLink to Y37D8A.12a.2Link to C38D4.1bLink to W05F2.2geneMap Link to K01G5.5.1Link to K01G5.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to W03G9.3Link to C38D4.1aLink to Y37D8A.12a.1Link to Y37D8A.12a.2Link to W05F2.2geneMap Link to W05F2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W03G9.3Link to K01G5.3Link to C38D4.1aLink to Y37D8A.12a.2Link to Y37D8A.12a.1Link to H04D03.1Link to C38D4.1bLink to Y37D8A.12bgeneMap Link to Y37D8A.12a.1Link to Y37D8A.12a.2Link to Y37D8A.12bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to W03G9.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to K01G5.3geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: TH:300C9_1 Ace View of TH:300C9_1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C38D4.1
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:4783197..4785138)
Transcript overlap: 1487 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1319
Relative score: 0.335 (Best raw score=1319 for Gene C38D4.1)
Specificity index: 0.084
Wormbase (BLAST) RNAi primary
External "C38D4.1" Links  Wormbase NCBI
Gene Inhibited  W03G9.3
Evidence for Inhibition 
Sliding Window Raw score: 1100
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.251
External "W03G9.3" Links  Wormbase NCBI
Gene Inhibited  H04D03.1
Evidence for Inhibition 
Sliding Window Raw score: 345
Relative score: 0.314 (Best raw score= for Gene )
Specificity index: 0.079
External "H04D03.1" Links  Wormbase NCBI
Gene Inhibited  K01G5.3
Evidence for Inhibition 
Sliding Window Raw score: 670
Relative score: 0.609 (Best raw score= for Gene )
Specificity index: 0.153
External "K01G5.3" Links  Wormbase NCBI
Gene Inhibited  W05F2.2
Evidence for Inhibition 
Sliding Window Raw score: 904
Relative score: 0.822 (Best raw score= for Gene )
Specificity index: 0.207
External "W05F2.2" Links  Wormbase NCBI
Gene Inhibited  Y37D8A.12
Evidence for Inhibition 
Sliding Window Raw score: 989
Relative score: 0.899 (Best raw score= for Gene )
Specificity index: 0.226
External "Y37D8A.12" Links  Wormbase NCBI
TH:300C9_1 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:300C9_1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:300C9_1 (PCR_reagent)
Remark  This RNAi has multiple targets in the genome, see also RNAi: TH:300C9_2
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of H04D03.1 Browse using GBrowse
Gene Graph
Gene Plot of W03G9.3 Browse using GBrowse
Gene Graph
Gene Plot of C38D4.1 Browse using GBrowse
Gene Graph
Gene Plot of K01G5.3 Browse using GBrowse
Gene Graph
Gene Plot of W05F2.2 Browse using GBrowse
Gene Graph
Gene Plot of Y37D8A.12 Browse using GBrowse
Gene Graph