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RNAi Experiment: TH:301g7 Ace View of TH:301g7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F48E8.5 (paa-1)
Description of "F48E8.5"  paa-1 encodes a homolog of PR65, the structural subunit of protein phosphatase 2A (PP2A); PAA-1 protein is bound by SMG-5; PAA-1 is required in mass RNAi assays for embryonic viability, fertility, and cuticular integrity.
KOG Annotation  Protein phosphatase 2A regulatory subunit A and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5450958..5452613)
Transcript overlap: 1461 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1356
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F48E8.5" Links  Wormbase NCBI
TH:301g7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
TH:301g7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:301g7 (PCR_reagent)
Remark  Phenotype comment -- Confirmed with independent dsRNA (F48E8.5-RNA2; similar phenotype).
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of F48E8.5 Browse using GBrowse
Gene Graph