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RNAi Experiment: TH:305E9 Ace View of TH:305E9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F44B9.8
Description of "F44B9.8"  Associated GO Term : ATP binding
KOG Annotation  Replication factor C, subunit RFC5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:8027707..8029297)
Transcript overlap: 1127 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1064
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.866
Wormbase (BLAST) RNAi primary
External "F44B9.8" Links  Wormbase NCBI
Gene Inhibited  F44B9.7 (pqn-38)
Description of "F44B9.7"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
KOG Annotation  Replication factor C, subunit RFC5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:8027707..8029297)
Transcript overlap: 186 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 165
Relative score: 0.155 (Best raw score= for Gene )
Specificity index: 0.134
Wormbase (BLAST) RNAi primary
External "F44B9.7" Links  Wormbase NCBI
TH:305E9 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:305E9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:305E9 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of F44B9.8 Browse using GBrowse
Gene Graph
Gene Plot of F44B9.7 Browse using GBrowse
Gene Graph