Link to ZK652.9RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to ZK652.4.1Link to ZK652.4.2Link to ZK652.4.4Link to ZK652.4.3Link to ZK652.4.5Link to ZK652.4.6Link to ZK652.10RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to ZK652.4.1Link to ZK652.4.2Link to ZK652.4.3Link to ZK652.4.6Link to ZK652.4.4Link to ZK652.4.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: TH:305F7 Ace View of TH:305F7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK652.9 (coq-5)
Description of "ZK652.9"  coq-5 encodes a putative ubiquinone biosynthesis methyltransferase, homologous to COQ5 in S. cerevisiae and a family of methyltransferases involved in ubiquinone, menaquinone, biotin and sterol biosynthesis and in phosphatidylethanolamine methylation; COQ-5 is required for ubiquinone biosynthesis and for normally short lifespan; coq-5(RNAi) animals have reduced levels of coenzyme Q8, coenzyme Q9, and superoxide, and have abnormally long lifespans.
KOG Annotation  Ubiquinone biosynthesis methyltransferase COQ5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:7855871..7858131)
Transcript overlap: 796 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 735
Relative score: 0.915 (Best raw score= for Gene )
Specificity index: 0.478
Wormbase (BLAST) RNAi primary
External "ZK652.9" Links  Wormbase NCBI
Gene Inhibited  ZK652.10 (tag-307)
KOG Annotation  Putative Mg2+ and Co2+ transporter CorD
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:7855871..7858131)
Transcript overlap: 919 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 803
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.522
Wormbase (BLAST) RNAi primary
External "ZK652.10" Links  Wormbase NCBI
Gene Inhibited  ZK652.4 (rpl-35)
Description of "ZK652.4"  rpl-35 encodes a large ribosomal subunit L35 protein.
KOG Annotation  60S ribosomal protein L35
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 9 nt Explain types of evidence for RNAi inhibition
External "ZK652.4" Links  Wormbase NCBI
TH:305F7 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:305F7 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:305F7 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of ZK652.4 Browse using GBrowse
Gene Graph
Gene Plot of ZK652.10 Browse using GBrowse
Gene Graph
Gene Plot of ZK652.9 Browse using GBrowse
Gene Graph