Link to ZC21.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y105C5A.18Link to Y45F10B.7Link to ZK1225.8Link to Y39A3A.7geneMap Link to F52F10.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C13B9.1.1Link to C13B9.1.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F23A7.7geneMap Link to Y50D7A.1Link to Y50D7A.7.1Link to Y50D7A.7.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: TH:307A12 Ace View of TH:307A12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZC21.2 (trp-1)
Description of "ZC21.2"  Associated GO Term : cation channel activity
KOG Annotation  Receptor-activated Ca2+-permeable cation channels (STRPC family)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:8540604..8542736)
Transcript overlap: 760 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 676
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.415
Wormbase (BLAST) RNAi primary
External "ZC21.2" Links  Wormbase NCBI
Gene Inhibited  Y105C5A.18
Evidence for Inhibition 
Sliding Window Raw score: 209
Relative score: 0.309 (Best raw score= for Gene )
Specificity index: 0.128
External "Y105C5A.18" Links  Wormbase NCBI
Gene Inhibited  Y45F10B.7
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.114 (Best raw score= for Gene )
Specificity index: 0.047
External "Y45F10B.7" Links  Wormbase NCBI
Gene Inhibited  B0344.1
Evidence for Inhibition 
Sliding Window Raw score: 211
Relative score: 0.312 (Best raw score= for Gene )
Specificity index: 0.13
External "B0344.1" Links  Wormbase NCBI
Gene Inhibited  F52F10.1
Evidence for Inhibition 
Sliding Window Raw score: 165
Relative score: 0.244 (Best raw score= for Gene )
Specificity index: 0.101
External "F52F10.1" Links  Wormbase NCBI
Gene Inhibited  ZK1225.8
Evidence for Inhibition 
Sliding Window Raw score: 133
Relative score: 0.197 (Best raw score= for Gene )
Specificity index: 0.082
External "ZK1225.8" Links  Wormbase NCBI
Gene Inhibited  C13B9.1
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.104 (Best raw score= for Gene )
Specificity index: 0.043
External "C13B9.1" Links  Wormbase NCBI
Gene Inhibited  Y50D7A.1
KOG Annotation  Kelch repeat-containing proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 86
Relative score: 0.127 (Best raw score= for Gene )
Specificity index: 0.053
External "Y50D7A.1" Links  Wormbase NCBI
TH:307A12 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:307A12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:307A12 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of Y105C5A.18 Browse using GBrowse
Gene Graph
Gene Plot of Y45F10B.7 Browse using GBrowse
Gene Graph
Gene Plot of B0344.1 Browse using GBrowse
Gene Graph
Gene Plot of ZC21.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK1225.8 Browse using GBrowse
Gene Graph
Gene Plot of F52F10.1 Browse using GBrowse
Gene Graph
Gene Plot of C13B9.1 Browse using GBrowse
Gene Graph
Gene Plot of Y50D7A.1 Browse using GBrowse
Gene Graph