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RNAi Experiment: TH:310B9 Ace View of TH:310B9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K10D2.7
Description of "K10D2.7"  Associated GO Term : sulfur metabolism
KOG Annotation  Molybdopterin converting factor, small subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:5195888..5196734)
Transcript overlap: 255 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 150
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.472
Wormbase (BLAST) RNAi primary
External "K10D2.7" Links  Wormbase NCBI
Gene Inhibited  K10D2.1
Description of "K10D2.1"  Associated GO Term : transcription regulator activity
KOG Annotation  Protein phosphatase 1, regulatory subunit, and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:5195888..5196734)
Transcript overlap: 98 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 77
Relative score: 0.513 (Best raw score= for Gene )
Specificity index: 0.242
External "K10D2.1" Links  Wormbase NCBI
Gene Inhibited  K10D2.6 (emb-8)
Description of "K10D2.6"  Uncloned locus required for embryonic viability, for the normal generation of anterior-posterior asymmetry in the early embryo, and for normal P Granule and GLP-1 asymmetry in early embryos.
KOG Annotation  NADP/FAD dependent oxidoreductase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:5195888..5196734)
Transcript overlap: 91 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 91
Relative score: 0.607 (Best raw score= for Gene )
Specificity index: 0.286
External "K10D2.6" Links  Wormbase NCBI
TH:310B9 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:310B9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:310B9 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of K10D2.7 Browse using GBrowse
Gene Graph
Gene Plot of K10D2.1 Browse using GBrowse
Gene Graph
Gene Plot of K10D2.6 Browse using GBrowse
Gene Graph