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RNAi Experiment: TH:311G1 Ace View of TH:311G1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZC395.7 (hap-1)
Description of "ZC395.7"  Associated GO Term : hydrolase activity
KOG Annotation  Inosine triphosphate pyrophosphatase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:5263527..5264922)
Transcript overlap: 624 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 497
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.667
Wormbase (BLAST) RNAi primary
External "ZC395.7" Links  Wormbase NCBI
Gene Inhibited  C34E10.1 (gop-3)
Description of "C34E10.1"  gop-3 encodes an ortholog of the mammalian CGI-51 (comparative gene identification-51) proteins that display a high degree of similarity to the Haemophilus influenza D15 protective surface antigen; loss of gop-3 activity via large-scale RNAi screens indicates that GOP-3 is required for embryonic and larval development, as well as for normal postembryonic growth rates.
KOG Annotation  Predicted cell surface protein homologous to bacterial outer membrane proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:5263527..5264922)
Transcript overlap: 268 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 248
Relative score: 0.499 (Best raw score= for Gene )
Specificity index: 0.333
Wormbase (BLAST) RNAi primary
External "C34E10.1" Links  Wormbase NCBI
TH:311G1 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:311G1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:311G1 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of C34E10.1 Browse using GBrowse
Gene Graph
Gene Plot of ZC395.7 Browse using GBrowse
Gene Graph