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RNAi Experiment: TH:320A12 Ace View of TH:320A12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K04H4.1 (emb-9)
Description of "K04H4.1"  emb-9 encodes the alpha-1 chain of Type IV basement membrane collagen most closely equivalent to human COL4A1 (OMIM:120130) on the basis of biological function; EMB-9 forms heterotrimeric Type IV collagen with LET-2, the alpha-2-like chain, and is required for the assembly and/or secretion of LET-2; EMB-9 is essential for embryonic morphogenesis, particularly epidermal elongation, and for larval development; EMB-9 is expresed primarily by body wall muscles and some somatic cells of the gonad and is detected in nearly all basement membranes.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9339671..9340866)
Transcript overlap: 1053 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1016
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "K04H4.1" Links  Wormbase NCBI
TH:320A12 Phenotypes Help with Phenotypes
Larval  Gro
TH:320A12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:320A12 (PCR_reagent)
Remark  Phenotype comment -- Not yet confirmed by independent RNA
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of K04H4.1 Browse using GBrowse
Gene Graph